implementation of Plugin for imagej using java

Astrocyte analysis -automatically segment Individual Glial Cells in 3D -classify astrocytes and provide volume and surface area -extract and count individual glial cells -measure degree of overlap with vessels -use and extend existing plugins Astrocyte analysis -automatically segment Individual Glial Cells in 3D -intelligent thresholding → brightness differences? -segmentation → use of seed points -extendable to larger data sets with multiple astrocytes -using seed points -overlapping/touching cell structures? Astrocyte analysis -classify astrocytes and provide volume and surface area -existing tools for quantification -describe number/length of cell extensions -define cell body? -describe number of bifurcations -skeletonize3d/analyze skeleton plugins? -group similar cells for classification